Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Olfr129-201ENSMUST00000122318 993 ntBASIC14.13□□□□□ -0.15
Trim55G3X8Y1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.12□□□□□ -0.15
Trim55G3X8Y1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim55G3X8Y1 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gm13312-201ENSMUST00000119631 718 ntBASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms