Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NpcdF8VQB8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.51■□□□□ 0.23
NpcdF8VQB8 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.51■□□□□ 0.23
NpcdF8VQB8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.51■□□□□ 0.23
NpcdF8VQB8 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.51■□□□□ 0.23
NpcdF8VQB8 Rps4l-202ENSMUST00000204242 789 ntBASIC16.51■□□□□ 0.23
NpcdF8VQB8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NpcdF8VQB8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.5■□□□□ 0.23
NpcdF8VQB8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.5■□□□□ 0.23
NpcdF8VQB8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Gm8227-201ENSMUST00000223306 571 ntBASIC16.5■□□□□ 0.23
NpcdF8VQB8 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.5■□□□□ 0.23
NpcdF8VQB8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NpcdF8VQB8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Gm25927-201ENSMUST00000175058 117 ntBASIC16.49■□□□□ 0.23
NpcdF8VQB8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.49■□□□□ 0.23
NpcdF8VQB8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Gm5161-201ENSMUST00000075243 853 ntBASIC16.49■□□□□ 0.23
NpcdF8VQB8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NpcdF8VQB8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms