Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Zc3h13E9Q784 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.51■□□□□ 0.55
Zc3h13E9Q784 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h13E9Q784 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h13E9Q784 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Gm38297-201ENSMUST00000195122 1057 ntBASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Gm44262-201ENSMUST00000204969 372 ntBASIC18.5■□□□□ 0.55
Zc3h13E9Q784 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h13E9Q784 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm43081-201ENSMUST00000199082 1380 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm11667-201ENSMUST00000119828 486 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm14704-201ENSMUST00000120300 874 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm26956-201ENSMUST00000182176 986 ntBASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h13E9Q784 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Mir6958-201ENSMUST00000184207 73 ntBASIC18.48■□□□□ 0.55
Zc3h13E9Q784 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h13E9Q784 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC18.47■□□□□ 0.55
Zc3h13E9Q784 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms