Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm44855-201ENSMUST00000205725 362 ntBASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm7730-201ENSMUST00000212486 454 ntBASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gm6218-201ENSMUST00000219812 628 ntBASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm28760-201ENSMUST00000185995 736 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm42612-201ENSMUST00000197986 623 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm43170-201ENSMUST00000199827 612 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cpsf4lE9Q2N0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4lE9Q2N0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Cpsf4lE9Q2N0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4lE9Q2N0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4lE9Q2N0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cpsf4lE9Q2N0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms