Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm40879-201ENSMUST00000220759 612 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm21811-201ENSMUST00000096485 930 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a3E9PWQ3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.27
Col6a3E9PWQ3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a3E9PWQ3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a3E9PWQ3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms