Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm7488-201ENSMUST00000117148 684 ntBASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.49□□□□□ -0.41
Gm3543D3Z235 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.48□□□□□ -0.41
Gm3543D3Z235 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.48□□□□□ -0.41
Gm3543D3Z235 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gm29667-201ENSMUST00000190817 490 ntBASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gm44855-201ENSMUST00000205725 362 ntBASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.48□□□□□ -0.41
Gm3543D3Z235 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3543D3Z235 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Gm15460-201ENSMUST00000118147 391 ntBASIC12.47□□□□□ -0.41
Gm3543D3Z235 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Gm15321-201ENSMUST00000121290 288 ntBASIC12.47□□□□□ -0.41
Gm3543D3Z235 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Gm3543D3Z235 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3543D3Z235 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms