Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usf3B2RUQ2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Gm28760-201ENSMUST00000185995 736 ntBASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usf3B2RUQ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Gm46209-201ENSMUST00000217912 553 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Gm9797-201ENSMUST00000052902 613 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usf3B2RUQ2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Gm12091-201ENSMUST00000146791 830 ntBASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Gm18624-201ENSMUST00000220966 658 ntBASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usf3B2RUQ2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms