Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Gm16505-201ENSMUST00000179981 232 ntBASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col4a6B1AVK5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm10434-201ENSMUST00000101158 471 ntBASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm23270-201ENSMUST00000104055 131 ntBASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm38317-201ENSMUST00000195564 343 ntBASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col4a6B1AVK5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm25732-201ENSMUST00000175168 60 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm43138-201ENSMUST00000199123 708 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col4a6B1AVK5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms