Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.34□□□□□ -0.11
Scn1aA2APX8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.33□□□□□ -0.11
Scn1aA2APX8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1aA2APX8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1aA2APX8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1aA2APX8 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.33□□□□□ -0.11
Scn1aA2APX8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1aA2APX8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1aA2APX8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.33□□□□□ -0.11
Scn1aA2APX8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.33□□□□□ -0.12
Scn1aA2APX8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.33□□□□□ -0.12
Scn1aA2APX8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.33□□□□□ -0.12
Scn1aA2APX8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1aA2APX8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.32□□□□□ -0.12
Scn1aA2APX8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.32□□□□□ -0.12
Scn1aA2APX8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Proscos-202ENSMUST00000178990 666 ntBASIC14.32□□□□□ -0.12
Scn1aA2APX8 Gm8652-201ENSMUST00000181363 964 ntBASIC14.32□□□□□ -0.12
Scn1aA2APX8 Gm44397-201ENSMUST00000195950 113 ntBASIC14.32□□□□□ -0.12
Scn1aA2APX8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.32□□□□□ -0.12
Scn1aA2APX8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1aA2APX8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms