Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a3A2ACT7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Mir686-201ENSMUST00000102174 109 ntBASIC13.37□□□□□ -0.27
Col9a3A2ACT7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Gm25261-201ENSMUST00000157416 134 ntBASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a3A2ACT7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm15770-201ENSMUST00000117498 584 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm7029-201ENSMUST00000173226 450 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm37497-201ENSMUST00000195830 798 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm7783-201ENSMUST00000204795 781 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm18056-201ENSMUST00000207670 568 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm18061-201ENSMUST00000208350 562 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm18063-201ENSMUST00000208529 568 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm18052-201ENSMUST00000208750 559 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms