Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mir698-201ENSMUST00000102164 109 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mir1895-201ENSMUST00000122615 79 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm9719-201ENSMUST00000162765 543 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm18206-201ENSMUST00000207027 926 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav12-1A0N8R1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms