Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.08□□□□□ -0.63
Trav12d-1A0N8R0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Trav12d-1A0N8R0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav12d-1A0N8R0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm17271-201ENSMUST00000165535 355 ntBASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm18733-201ENSMUST00000173950 856 ntBASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm45612-201ENSMUST00000211320 160 ntBASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm10819-201ENSMUST00000099988 561 ntBASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav12d-1A0N8R0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms