Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Mir497b-201ENSMUST00000093601 125 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc112A0AUP1 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc112A0AUP1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Mir698-201ENSMUST00000102164 109 ntBASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms