Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Gm4804-201ENSMUST00000182234 999 ntBASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Gm21470-201ENSMUST00000187680 696 ntBASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Gm5279-201ENSMUST00000199575 745 ntBASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Gm43630-201ENSMUST00000201550 776 ntBASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cfap99A0A140LIX9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Gm11425-201ENSMUST00000119608 498 ntBASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Mir7654-201ENSMUST00000185082 70 ntBASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Gm9396-201ENSMUST00000076703 567 ntBASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cfap99A0A140LIX9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm27892-201ENSMUST00000185017 106 ntBASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm18307-201ENSMUST00000206864 949 ntBASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cfap99A0A140LIX9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cfap99A0A140LIX9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cfap99A0A140LIX9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cfap99A0A140LIX9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cfap99A0A140LIX9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Cfap99A0A140LIX9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cfap99A0A140LIX9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cfap99A0A140LIX9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms