Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Gm9719-201ENSMUST00000162765 543 ntBASIC11.3□□□□□ -0.6
Trav18A0A075B656 Mir6990-201ENSMUST00000183724 91 ntBASIC11.3□□□□□ -0.6
Trav18A0A075B656 Gm18766-201ENSMUST00000189811 808 ntBASIC11.3□□□□□ -0.6
Trav18A0A075B656 Gm29541-201ENSMUST00000191351 678 ntBASIC11.3□□□□□ -0.6
Trav18A0A075B656 Gm37714-201ENSMUST00000194742 342 ntBASIC11.3□□□□□ -0.6
Trav18A0A075B656 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.29□□□□□ -0.6
Trav18A0A075B656 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gm25287-201ENSMUST00000103846 110 ntBASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gm22918-201ENSMUST00000103855 110 ntBASIC11.29□□□□□ -0.6
Trav18A0A075B656 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.29□□□□□ -0.6
Trav18A0A075B656 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav18A0A075B656 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm44335-201ENSMUST00000196879 141 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm44297-201ENSMUST00000198304 141 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm44346-201ENSMUST00000198851 141 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms