Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hdac6Q9Z2V5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac6Q9Z2V5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm16570-201ENSMUST00000161951 436 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm26461-201ENSMUST00000175064 290 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms