Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm14767-201ENSMUST00000121559 586 ntBASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Gm44344-201ENSMUST00000200287 129 ntBASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gm13223-201ENSMUST00000118609 747 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gm13453-201ENSMUST00000118708 357 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gm33320-201ENSMUST00000192232 530 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClcnkaQ9WUB7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Acot6-202ENSMUST00000222921 3622 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm18027-201ENSMUST00000218947 619 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm9229-201ENSMUST00000222777 126 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms