Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Gm8810-201ENSMUST00000172895 754 ntBASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Gm8652-201ENSMUST00000181363 964 ntBASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn8aQ9WTU3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn8aQ9WTU3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gm13226-201ENSMUST00000117838 404 ntBASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gm12203-201ENSMUST00000118235 598 ntBASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gm12209-201ENSMUST00000120089 596 ntBASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn8aQ9WTU3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Gm4984-201ENSMUST00000115987 360 ntBASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms