Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm15770-201ENSMUST00000117498 584 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm15376-201ENSMUST00000122258 783 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm26464-201ENSMUST00000157094 305 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm5866-201ENSMUST00000177881 973 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm28631-201ENSMUST00000190740 334 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm24447-201ENSMUST00000083977 338 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3aQ9JKX8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms