Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 AA414768-201ENSMUST00000121924 1257 ntBASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trem1Q9JKE2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trem1Q9JKE2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trem1Q9JKE2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trem1Q9JKE2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Gm27646-201ENSMUST00000183989 110 ntBASIC12.33□□□□□ -0.44
Trem1Q9JKE2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.33□□□□□ -0.44
Trem1Q9JKE2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trem1Q9JKE2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms