Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm29310-201ENSMUST00000185468 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21825-201ENSMUST00000185728 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm29109-201ENSMUST00000185895 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21896-201ENSMUST00000186520 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21873-201ENSMUST00000186728 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21794-201ENSMUST00000187056 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21880-201ENSMUST00000187275 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21826-201ENSMUST00000187451 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21198-201ENSMUST00000188393 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21749-201ENSMUST00000189343 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21901-201ENSMUST00000189568 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm29424-201ENSMUST00000189716 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm28599-201ENSMUST00000189838 694 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21867-201ENSMUST00000189917 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm29269-201ENSMUST00000190087 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21722-201ENSMUST00000190153 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm28423-201ENSMUST00000190701 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21899-201ENSMUST00000190745 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21910-201ENSMUST00000191163 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21849-201ENSMUST00000191571 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm28678-201ENSMUST00000191593 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm20910-201ENSMUST00000193268 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm21871-201ENSMUST00000194621 696 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gm9063-201ENSMUST00000223299 582 ntBASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Gm5866-201ENSMUST00000177881 973 ntBASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb3Q9ERD7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Shd-206ENSMUST00000225145 998 ntBASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms