Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Mir6979-201ENSMUST00000183927 56 ntBASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-4Q9EQM3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Mospd4-201ENSMUST00000180618 576 ntBASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm21769-201ENSMUST00000211922 111 ntBASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-4Q9EQM3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms