Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdc40Q9DC48 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdc40Q9DC48 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.83□□□□□ -0.35
Cdc40Q9DC48 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdc40Q9DC48 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdc40Q9DC48 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm14928-201ENSMUST00000120198 477 ntBASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm9522-201ENSMUST00000182394 926 ntBASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdc40Q9DC48 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Gm9794-201ENSMUST00000202370 423 ntBASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms