Protein–RNA interactions for Protein: Q9D304

Rnf128, E3 ubiquitin-protein ligase RNF128, mousemouse

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf128Q9D304 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf128Q9D304 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf128Q9D304 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.69□□□□□ -0.38
Rnf128Q9D304 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.69□□□□□ -0.38
Rnf128Q9D304 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.69□□□□□ -0.38
Rnf128Q9D304 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf128Q9D304 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 BC001981-202ENSMUST00000191393 1545 ntBASIC12.68□□□□□ -0.38
Rnf128Q9D304 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm15653-201ENSMUST00000119247 907 ntBASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm44344-201ENSMUST00000200287 129 ntBASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Shd-206ENSMUST00000225145 998 ntBASIC12.68□□□□□ -0.38
Rnf128Q9D304 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.68□□□□□ -0.38
Rnf128Q9D304 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.68□□□□□ -0.38
Rnf128Q9D304 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf128Q9D304 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.67□□□□□ -0.38
Rnf128Q9D304 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Gm27306-201ENSMUST00000183970 107 ntBASIC12.67□□□□□ -0.38
Rnf128Q9D304 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf128Q9D304 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.67□□□□□ -0.38
Rnf128Q9D304 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Mir125a-201ENSMUST00000083545 68 ntBASIC12.67□□□□□ -0.38
Rnf128Q9D304 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf128Q9D304 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf128Q9D304 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms