Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 AV026068-213ENSMUST00000223675 1171 ntBASIC13.83□□□□□ -0.2
Trim42Q9D2H5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm25927-201ENSMUST00000175058 117 ntBASIC13.82□□□□□ -0.2
Trim42Q9D2H5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm34391-201ENSMUST00000203706 907 ntBASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim42Q9D2H5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Gm24589-201ENSMUST00000116692 94 ntBASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Gm7153-201ENSMUST00000117092 455 ntBASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim42Q9D2H5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms