Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm15165-201ENSMUST00000118140 502 ntBASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm9172-201ENSMUST00000212092 954 ntBASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Gm18669-201ENSMUST00000216049 778 ntBASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem88Q9D0N8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem88Q9D0N8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem88Q9D0N8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tmem88Q9D0N8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms