Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chaf1bQ9D0N7 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chaf1bQ9D0N7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Gm17968-201ENSMUST00000194902 784 ntBASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chaf1bQ9D0N7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Gm12882-201ENSMUST00000121696 517 ntBASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms