Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Thap2-203ENSMUST00000218989 527 ntBASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.12□□□□□ -0.47
Raet1eQ9CZQ6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Gm29741-201ENSMUST00000192667 421 ntBASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Gm18669-201ENSMUST00000216049 778 ntBASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Raet1eQ9CZQ6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm15483-201ENSMUST00000120338 456 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm6376-201ENSMUST00000209407 580 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Rps4l-201ENSMUST00000071745 943 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Raet1eQ9CZQ6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Raet1eQ9CZQ6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms