Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Gm45747-201ENSMUST00000212203 999 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Gm10154-201ENSMUST00000084445 354 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Mrpl55Q9CZ83 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Gm17968-201ENSMUST00000194902 784 ntBASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Mrpl55Q9CZ83 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Mrpl55Q9CZ83 Map1b-203ENSMUST00000223725 2669 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms