Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RpainQ9CWY9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RpainQ9CWY9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RpainQ9CWY9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RpainQ9CWY9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RpainQ9CWY9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RpainQ9CWY9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm18737-201ENSMUST00000173594 937 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RpainQ9CWY9 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.45□□□□□ -0.1
RpainQ9CWY9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.44□□□□□ -0.1
RpainQ9CWY9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.44□□□□□ -0.1
RpainQ9CWY9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.44□□□□□ -0.1
RpainQ9CWY9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RpainQ9CWY9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RpainQ9CWY9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RpainQ9CWY9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.43□□□□□ -0.1
RpainQ9CWY9 Gm38225-201ENSMUST00000194001 393 ntBASIC14.43□□□□□ -0.1
RpainQ9CWY9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RpainQ9CWY9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.43□□□□□ -0.1
RpainQ9CWY9 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms