Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Gm24694-201ENSMUST00000180054 110 ntBASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Gm27663-201ENSMUST00000184839 110 ntBASIC15.46■□□□□ 0.07
Smc1aQ9CU62 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc1aQ9CU62 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc1aQ9CU62 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Smc1aQ9CU62 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smc1aQ9CU62 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.06
Smc1aQ9CU62 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smc1aQ9CU62 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc1aQ9CU62 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Grk6-205ENSMUST00000224653 2976 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm9794-201ENSMUST00000202370 423 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Shd-206ENSMUST00000225145 998 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smc1aQ9CU62 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Gm15321-201ENSMUST00000121290 288 ntBASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1aQ9CU62 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms