Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm13297-201ENSMUST00000120205 934 ntBASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm6222-202ENSMUST00000182143 629 ntBASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm38158-201ENSMUST00000194617 339 ntBASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd1Q9CQX5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd1Q9CQX5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.02□□□□□ -0.16
Cldnd1Q9CQX5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm4986-201ENSMUST00000119731 549 ntBASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm43138-201ENSMUST00000199123 708 ntBASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms