Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Mir698-201ENSMUST00000102164 109 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Gm11594-201ENSMUST00000122313 162 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Gm33320-201ENSMUST00000192232 530 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb1Q9CQ70 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm12428-201ENSMUST00000119844 727 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm15693-201ENSMUST00000120470 637 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm14822-201ENSMUST00000122247 291 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm5312-201ENSMUST00000203728 547 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Chchd1-203ENSMUST00000224633 557 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb1Q9CQ70 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb1Q9CQ70 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms