Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl54Q9CPW3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mrpl54Q9CPW3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.21□□□□□ -0.46
Mrpl54Q9CPW3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Mrpl54Q9CPW3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms