Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm5781-201ENSMUST00000219792 443 ntBASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm11531-201ENSMUST00000117614 555 ntBASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.73□□□□□ -0.21
Cdh23Q99PF4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh23Q99PF4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm8712-201ENSMUST00000221090 701 ntBASIC13.72□□□□□ -0.21
Cdh23Q99PF4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.72□□□□□ -0.21
Cdh23Q99PF4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Gm37905-201ENSMUST00000195310 341 ntBASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms