Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm10175-201ENSMUST00000086013 645 ntBASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gm18049-201ENSMUST00000208909 581 ntBASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nkd1Q99MH6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Gm18244-201ENSMUST00000219747 1566 ntBASIC13□□□□□ -0.33
Nkd1Q99MH6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Gm6539-201ENSMUST00000119157 1064 ntBASIC13□□□□□ -0.33
Nkd1Q99MH6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Gm27494-201ENSMUST00000184735 189 ntBASIC13□□□□□ -0.33
Nkd1Q99MH6 Gm8000-201ENSMUST00000188378 592 ntBASIC13□□□□□ -0.33
Nkd1Q99MH6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 AC139350.3-201ENSMUST00000226151 420 ntBASIC13□□□□□ -0.33
Nkd1Q99MH6 AC149588.3-201ENSMUST00000227515 150 ntBASIC13□□□□□ -0.33
Nkd1Q99MH6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkd1Q99MH6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkd1Q99MH6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms