Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tlr3Q99MB1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gm13385-201ENSMUST00000121089 220 ntBASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gm9794-201ENSMUST00000202370 423 ntBASIC14.81□□□□□ -0.04
Tlr3Q99MB1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gm44719-201ENSMUST00000206404 149 ntBASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tlr3Q99MB1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Gm28631-201ENSMUST00000190740 334 ntBASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.8□□□□□ -0.04
Tlr3Q99MB1 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.8□□□□□ -0.04
Tlr3Q99MB1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms