Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Mir877-201ENSMUST00000104738 85 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx6-1Q99MA9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms