Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Gm15693-201ENSMUST00000120470 637 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Acot6-202ENSMUST00000222921 3622 ntBASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf3Q99LI7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Mir449b-201ENSMUST00000104833 80 ntBASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Gm12428-201ENSMUST00000119844 727 ntBASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Gm6916-202ENSMUST00000205523 195 ntBASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Gm5779-201ENSMUST00000218467 910 ntBASIC13.35□□□□□ -0.27
Cstf3Q99LI7 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf3Q99LI7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf3Q99LI7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms