Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf1Q99LC2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf1Q99LC2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf1Q99LC2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Gm8927-201ENSMUST00000181978 981 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Gm7783-201ENSMUST00000204795 781 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Gm3222-201ENSMUST00000071282 990 ntBASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf1Q99LC2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm11803-201ENSMUST00000119966 444 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm26461-201ENSMUST00000175064 290 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm38223-201ENSMUST00000194484 695 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm44364-201ENSMUST00000198368 141 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm19309-201ENSMUST00000218295 205 ntBASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf1Q99LC2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf1Q99LC2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms