Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Gm24420-201ENSMUST00000176676 59 ntBASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Gm27306-201ENSMUST00000183970 107 ntBASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb1Q91Y08 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.34□□□□□ -0.11
Pcdhb1Q91Y08 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb1Q91Y08 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb1Q91Y08 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb1Q91Y08 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Pcdhb1Q91Y08 Gm15920-201ENSMUST00000118998 402 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms