Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Gm5866-201ENSMUST00000177881 973 ntBASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Gm43094-201ENSMUST00000196549 921 ntBASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb22Q91XZ8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb22Q91XZ8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Gm28631-201ENSMUST00000190740 334 ntBASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb22Q91XZ8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm19220-201ENSMUST00000222682 803 ntBASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb22Q91XZ8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms