Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm18766-201ENSMUST00000189811 808 ntBASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm29541-201ENSMUST00000191351 678 ntBASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm2213-201ENSMUST00000197485 688 ntBASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb4Q91XZ6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gm45453-201ENSMUST00000211758 853 ntBASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb4Q91XZ6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm22065-201ENSMUST00000103753 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm22066-201ENSMUST00000103761 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm24932-201ENSMUST00000103763 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm24115-201ENSMUST00000103799 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm22190-201ENSMUST00000103827 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm22191-201ENSMUST00000103831 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm24721-201ENSMUST00000103849 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm28018-201ENSMUST00000103869 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm26399-201ENSMUST00000103937 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm5566-201ENSMUST00000116118 459 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm25349-201ENSMUST00000177728 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm23616-201ENSMUST00000177797 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm25871-201ENSMUST00000177816 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm24752-201ENSMUST00000178240 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm24496-201ENSMUST00000178287 110 ntBASIC13.72□□□□□ -0.21
Pcdhb4Q91XZ6 Gm25649-201ENSMUST00000178476 110 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms