Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Gm15487-201ENSMUST00000122373 465 ntBASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb6Q91XZ4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Gm21854-201ENSMUST00000179901 471 ntBASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Mir7684-201ENSMUST00000183858 60 ntBASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Gm18905-201ENSMUST00000205454 928 ntBASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb6Q91XZ4 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.15□□□□□ -0.15
Pcdhb6Q91XZ4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Gm12151-201ENSMUST00000121374 290 ntBASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms