Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Gm8652-201ENSMUST00000181363 964 ntBASIC14.67□□□□□ -0.06
TraipQ8VIG6 Gm43438-201ENSMUST00000198133 379 ntBASIC14.67□□□□□ -0.06
TraipQ8VIG6 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.67□□□□□ -0.06
TraipQ8VIG6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.66□□□□□ -0.06
TraipQ8VIG6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 AY702102-202ENSMUST00000194651 1173 ntBASIC14.66□□□□□ -0.06
TraipQ8VIG6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.66□□□□□ -0.06
TraipQ8VIG6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.66□□□□□ -0.06
TraipQ8VIG6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TraipQ8VIG6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.65□□□□□ -0.06
TraipQ8VIG6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Gm27847-201ENSMUST00000183711 107 ntBASIC14.65□□□□□ -0.06
TraipQ8VIG6 Gm27375-201ENSMUST00000183799 107 ntBASIC14.65□□□□□ -0.06
TraipQ8VIG6 Gm27839-201ENSMUST00000184242 106 ntBASIC14.65□□□□□ -0.06
TraipQ8VIG6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TraipQ8VIG6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.64□□□□□ -0.07
TraipQ8VIG6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms