Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.28□□□□□ -0.12
Trim60Q8VI40 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.28□□□□□ -0.12
Trim60Q8VI40 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim60Q8VI40 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.27□□□□□ -0.12
Trim60Q8VI40 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim60Q8VI40 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Gm5264-201ENSMUST00000190584 848 ntBASIC14.27□□□□□ -0.13
Trim60Q8VI40 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim60Q8VI40 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim60Q8VI40 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.26□□□□□ -0.13
Trim60Q8VI40 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim60Q8VI40 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim60Q8VI40 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms