Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gm13884-201ENSMUST00000118103 829 ntBASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Rpph1-201ENSMUST00000175096 319 ntBASIC11.25□□□□□ -0.61
Nup35Q8R4R6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.25□□□□□ -0.61
Nup35Q8R4R6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gm5864-201ENSMUST00000202263 970 ntBASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.25□□□□□ -0.61
Nup35Q8R4R6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Gm29741-201ENSMUST00000192667 421 ntBASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nup35Q8R4R6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Gm12350-201ENSMUST00000121208 462 ntBASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.23□□□□□ -0.61
Nup35Q8R4R6 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nup35Q8R4R6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms