Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc58Q8R3Q6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc58Q8R3Q6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc58Q8R3Q6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Gm25925-201ENSMUST00000158314 306 ntBASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc58Q8R3Q6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc58Q8R3Q6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms