Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm14350-201ENSMUST00000116642 640 ntBASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm2231-201ENSMUST00000125661 612 ntBASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm9678-201ENSMUST00000198979 1149 ntBASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm15770-201ENSMUST00000117498 584 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm12217-201ENSMUST00000118858 696 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm12403-201ENSMUST00000121384 959 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm8959-201ENSMUST00000213150 571 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx54Q8K4L0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Mir6927-201ENSMUST00000184494 71 ntBASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx54Q8K4L0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms