Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Gm14057-201ENSMUST00000120631 482 ntBASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm15240-201ENSMUST00000118156 720 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm24694-201ENSMUST00000180054 110 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm27663-201ENSMUST00000184839 110 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm29667-201ENSMUST00000190817 490 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm18905-201ENSMUST00000205454 928 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf39Q8K2Z2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Auts2-212ENSMUST00000178555 309 ntBASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf39Q8K2Z2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms